Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015792917.1_cds_XP_016515057.1_2669
CDS Infomation

[gene=LOC107831774] [db_xref=GeneID:107831774] [protein=zinc finger CCCH domain-containing protein 17-like] [protein_id=XP_016515057.1] [location=complement(join(45083..46984,47160..47270,48835..48981))] [gbkey=CDS]
Sequence

ATGGTGGGTCCTACACCGCCGCAGCAGCTACAAATTCAGACGCCTTCTACGGCCGCGGCG
CCAGCCACATTATCAGCTGAAGATGAAGCTCTTAAACGAAACACTGATTGTGTCTACTTC
CTCGCTTCTCCTCTTACCTGCAAAAAAGGAAGCGAGTGTGAGTACCGCCATAGTGACGTA
GCTCGGCTTAATCCTCGAGATTGCTGGTACTGGTTGAATGGAAGCTGCTTAAACCCAAAG
TGCGGGTTCCGGCATCCTCCGCTTGATGGATTTTTGGGAGCTCAAGTTCAAACTCCTACG
GGATCTTCTGTACCTCCAGTGGCATCTGTTGCACCTACACCAAATGTTCCATATGGTTCT
GGTAAGCAAGGTGTACCCTGCATATTCTTCCAGCAAGGCTTCTGTTTAAAAGGTGATAGG
TGTCCGTTCTTCCATGCACCGATCTCTGTACCTAACAAAGCCCCACCACATCCTGTATCT
ACTGCATCTACTGAGAAAAACCCTTTTAAGAAGGCATTTGGTAGGCTTGAAAAGTGTGTG
CAAGGAAAGACATTTTCTCAAGCAAATACTTGGAAGTCTGGTGGATTACCTCTACAAGCA
CAACCAATTGGGAAACTGGGAACTCATTTGTCCAAGAATGACTCTGCCTTTAACGAGAAC
GTGCTGCCACCAAATTCTGTCATTGATGTTGTGCATCACAGGCACAAACCAAAAGGTGTG
CCTCCTACAAATGGAAATCCTGTTGGTAGGTCCAACAGAGTGCATCAGTCTGTCAGGTTT
GATGATCACAGCAGCATTCAGAACAAGGGTGATGATATTTCAAGGGAGCTTTCGCCTGGT
TTTGATGTTCTTGTGGATGATGAGCTAAGAGGTAATGATTTCTATCACGGTGAAGATCAG
TATGGCAGAGATGCGGAAAGGAATGAATACGATATTGGCCGCTCTGCCGATTACACTTCA
GTAGCAGATAATGACCAAGATGCATACCATGATGTGTACGAGCGTGACTCTCACGACAGG
CTTGCGGGTCGCTCTGGTAGGGTGCAGCATAGAGCTTCTTCTGAGATAATACAAGGGGAA
TCAGCTCATCTTGAGAGGAGACGCTATGGTAGAGCGTACAGCCCCGAAGAAGTTCGAGAG
TCAGATCTGAGACATCGTTTATCAAAGCATAAGAGGGTTAATGGGTTGAGGTCAGTCATT
AGTCATGACTATGCAAGTGAAAAGCATGTTGATGATCGAGGCTACCAGGGTTCCAGGAGG
GATCGACAGCATTTACCCTCACATGATAGTTCTGTTGCTAGTCGTCTTCGAGGAAGAATA
AAGTTACCAAGTAGATCATCCTCTCCAACTAATGGGGCGGACATGGGGTTAGATAGGGAA
ACGGATAGGGCTAGGAACCGTGGCAGGTTATCTTTAGAAAGGCCCCAGCTTTTCTCTCAA
CAGGGAAGGCTTCGTGATAGAATAAAGGGAAGAGTGCAGGAGGATCTCAGTAATGCTGGA
AGAAATAACAGTGGTCCACGCCTTAGAAAAGATATAAGTGAGAATAATTCTGATTTTTCT
GGTCCACGAAGGCTTGCAGAACTTAAAGGTAGGAAAACTGCTGAGACCAGTGAACAAAAT
GTCGACGAGCAACAGGCCCTAGGGAAGCGTAAGTTCCAAAAGCATGATAGCTATCAGCAA
AGTGGAGGTGATCTATCATTTGAAGGACCAATGCCTCTGCAAGAGATCCTGAAGAGAAAA
AGAAGAAGTGAAACGGGCATGCCATCTGATAAGAGTGAAGACTATCAACATGAAAGAAAA
GACCACTCATTGGTAACTTCCTCAATCTCCAGGAGCAGGTCTGACCTTGGGCAAAAGGAA
GAATCTGATCCTCCATCAGGTGAGAAAAATGGGCCTCAAGAGACGATATCTGCTGGTCAT
CAATCTCCTCTACACGATGGTGCAAATGAACTTGAAGCTGAAGAAGGGATGATTGTGGAA
GAAGAAGATGATCAAGACCCCGAAGGTCATGATCAGAGAGATTATGATTATGAGCAGGTT
GATGGTGAAGACTACAATTTAGATGAAGGTGAGAATGCTGACGCTGGTGAGGAATACCTA
GATGAAGATGACGATGATGGAGATGACTTTGCAAAGAAGATGGGTGTTGTTTTCTCGTAG

Peptide Sequence

PEP ID

XP_016515057.1
PEP Infomation

PREDICTED: zinc finger CCCH domain-containing protein 17-like [Nicotiana tabacum]
Sequence

MVGPTPPQQLQIQTPSTAAAPATLSAEDEALKRNTDCVYFLASPLTCKKGSECEYRHSDV
ARLNPRDCWYWLNGSCLNPKCGFRHPPLDGFLGAQVQTPTGSSVPPVASVAPTPNVPYGS
GKQGVPCIFFQQGFCLKGDRCPFFHAPISVPNKAPPHPVSTASTEKNPFKKAFGRLEKCV
QGKTFSQANTWKSGGLPLQAQPIGKLGTHLSKNDSAFNENVLPPNSVIDVVHHRHKPKGV
PPTNGNPVGRSNRVHQSVRFDDHSSIQNKGDDISRELSPGFDVLVDDELRGNDFYHGEDQ
YGRDAERNEYDIGRSADYTSVADNDQDAYHDVYERDSHDRLAGRSGRVQHRASSEIIQGE
SAHLERRRYGRAYSPEEVRESDLRHRLSKHKRVNGLRSVISHDYASEKHVDDRGYQGSRR
DRQHLPSHDSSVASRLRGRIKLPSRSSSPTNGADMGLDRETDRARNRGRLSLERPQLFSQ
QGRLRDRIKGRVQEDLSNAGRNNSGPRLRKDISENNSDFSGPRRLAELKGRKTAETSEQN
VDEQQALGKRKFQKHDSYQQSGGDLSFEGPMPLQEILKRKRRSETGMPSDKSEDYQHERK
DHSLVTSSISRSRSDLGQKEESDPPSGEKNGPQETISAGHQSPLHDGANELEAEEGMIVE
EEDDQDPEGHDQRDYDYEQVDGEDYNLDEGENADAGEEYLDEDDDDGDDFAKKMGVVFS

Transcript Sequence

Gene sequence data has not been registered.